Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Gm14767-201ENSMUST00000121559 586 ntBASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh1F7BJK1 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Gm27618-201ENSMUST00000183671 60 ntBASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh1F7BJK1 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms