Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc188F6WEU2 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Mir181d-201ENSMUST00000102383 72 ntBASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Gm6630-201ENSMUST00000119199 454 ntBASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Gm4726-201ENSMUST00000135604 736 ntBASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Gm6019-201ENSMUST00000148369 736 ntBASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Gm27530-201ENSMUST00000184096 98 ntBASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc188F6WEU2 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Gm13549-201ENSMUST00000118339 796 ntBASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Gm1848-201ENSMUST00000120711 789 ntBASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Gm10774-201ENSMUST00000188689 204 ntBASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Gm18463-201ENSMUST00000207258 474 ntBASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Gm44953-201ENSMUST00000208745 1286 ntBASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Gm13384-201ENSMUST00000117166 1344 ntBASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc188F6WEU2 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc188F6WEU2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccdc188F6WEU2 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc188F6WEU2 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc188F6WEU2 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc188F6WEU2 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc188F6WEU2 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc188F6WEU2 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc188F6WEU2 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc188F6WEU2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc188F6WEU2 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc188F6WEU2 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc188F6WEU2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc188F6WEU2 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms