Protein–RNA interactions for Protein: F6RGA8

C530025M09Rik, RIKEN cDNA C530025M09 gene, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C530025M09RikF6RGA8 AC132104.2-201ENSMUST00000215011 266 ntBASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.03
C530025M09RikF6RGA8 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
C530025M09RikF6RGA8 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
C530025M09RikF6RGA8 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
C530025M09RikF6RGA8 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
C530025M09RikF6RGA8 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
C530025M09RikF6RGA8 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
C530025M09RikF6RGA8 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC8.65□□□□□ -1.03
C530025M09RikF6RGA8 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
C530025M09RikF6RGA8 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
C530025M09RikF6RGA8 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
C530025M09RikF6RGA8 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
C530025M09RikF6RGA8 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
C530025M09RikF6RGA8 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
C530025M09RikF6RGA8 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
C530025M09RikF6RGA8 Gm43045-201ENSMUST00000198725 2095 ntBASIC8.65□□□□□ -1.03
C530025M09RikF6RGA8 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Gm45011-201ENSMUST00000207620 2297 ntBASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 AC129336.1-201ENSMUST00000220224 2277 ntBASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Gm23935-201ENSMUST00000102303 57 ntBASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Gm24270-201ENSMUST00000102326 57 ntBASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Gm15376-201ENSMUST00000122258 783 ntBASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Gm24245-201ENSMUST00000157318 57 ntBASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Gm26308-201ENSMUST00000157768 69 ntBASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 AC134335.2-201ENSMUST00000227660 440 ntBASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
C530025M09RikF6RGA8 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms