Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh17E9PXF0 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh17E9PXF0 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Gm10146-201ENSMUST00000072739 309 ntBASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Olfr582-201ENSMUST00000098212 960 ntBASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pcdh17E9PXF0 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Gm22018-201ENSMUST00000104357 131 ntBASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Gm38002-201ENSMUST00000193255 180 ntBASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Gm18041-201ENSMUST00000218210 618 ntBASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Snora73a-201ENSMUST00000082453 205 ntBASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh17E9PXF0 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms