Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Clca3bE9PUL3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clca3bE9PUL3 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.11□□□□□ -0.15
Clca3bE9PUL3 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clca3bE9PUL3 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clca3bE9PUL3 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clca3bE9PUL3 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.11□□□□□ -0.15
Clca3bE9PUL3 Gm11591-201ENSMUST00000120063 702 ntBASIC14.11□□□□□ -0.15
Clca3bE9PUL3 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.11□□□□□ -0.15
Clca3bE9PUL3 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clca3bE9PUL3 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clca3bE9PUL3 Gm17208-201ENSMUST00000168388 535 ntBASIC14.11□□□□□ -0.15
Clca3bE9PUL3 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Clca3bE9PUL3 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.11□□□□□ -0.15
Clca3bE9PUL3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clca3bE9PUL3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.11□□□□□ -0.15
Clca3bE9PUL3 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.11□□□□□ -0.15
Clca3bE9PUL3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clca3bE9PUL3 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clca3bE9PUL3 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clca3bE9PUL3 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clca3bE9PUL3 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clca3bE9PUL3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clca3bE9PUL3 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clca3bE9PUL3 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clca3bE9PUL3 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.1□□□□□ -0.15
Clca3bE9PUL3 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.1□□□□□ -0.15
Clca3bE9PUL3 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.1□□□□□ -0.15
Clca3bE9PUL3 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Gm18054-201ENSMUST00000207539 555 ntBASIC14.09□□□□□ -0.15
Clca3bE9PUL3 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Gm9899-201ENSMUST00000065519 555 ntBASIC14.09□□□□□ -0.15
Clca3bE9PUL3 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clca3bE9PUL3 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms