Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Gm9385-201ENSMUST00000117563 472 ntBASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccnb1ip1D3Z3K2 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Gm6222-201ENSMUST00000120787 396 ntBASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Gm6659-201ENSMUST00000174752 547 ntBASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ccnb1ip1D3Z3K2 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccnb1ip1D3Z3K2 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Ccnb1ip1D3Z3K2 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccnb1ip1D3Z3K2 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccnb1ip1D3Z3K2 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccnb1ip1D3Z3K2 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccnb1ip1D3Z3K2 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.8□□□□□ -0.52
Ccnb1ip1D3Z3K2 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccnb1ip1D3Z3K2 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccnb1ip1D3Z3K2 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccnb1ip1D3Z3K2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ccnb1ip1D3Z3K2 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccnb1ip1D3Z3K2 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Ccnb1ip1D3Z3K2 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccnb1ip1D3Z3K2 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccnb1ip1D3Z3K2 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccnb1ip1D3Z3K2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Ccnb1ip1D3Z3K2 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccnb1ip1D3Z3K2 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Ccnb1ip1D3Z3K2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Ccnb1ip1D3Z3K2 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms