Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn1aA2APX8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn1aA2APX8 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn1aA2APX8 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Scn1aA2APX8 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.69□□□□□ -0.22
Scn1aA2APX8 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn1aA2APX8 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.69□□□□□ -0.22
Scn1aA2APX8 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.69□□□□□ -0.22
Scn1aA2APX8 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.69□□□□□ -0.22
Scn1aA2APX8 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.69□□□□□ -0.22
Scn1aA2APX8 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn1aA2APX8 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Scn1aA2APX8 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn1aA2APX8 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Scn1aA2APX8 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Scn1aA2APX8 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn1aA2APX8 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn1aA2APX8 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Scn1aA2APX8 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn1aA2APX8 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn1aA2APX8 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1aA2APX8 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Scn1aA2APX8 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.68□□□□□ -0.22
Scn1aA2APX8 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Gm6334-201ENSMUST00000207083 228 ntBASIC13.68□□□□□ -0.22
Scn1aA2APX8 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.68□□□□□ -0.22
Scn1aA2APX8 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.68□□□□□ -0.22
Scn1aA2APX8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Gm2991-201ENSMUST00000173338 480 ntBASIC13.68□□□□□ -0.22
Scn1aA2APX8 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Gm38341-201ENSMUST00000195357 515 ntBASIC13.68□□□□□ -0.22
Scn1aA2APX8 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.68□□□□□ -0.22
Scn1aA2APX8 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
Scn1aA2APX8 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.68□□□□□ -0.22
Scn1aA2APX8 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.68□□□□□ -0.22
Scn1aA2APX8 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1aA2APX8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1aA2APX8 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1aA2APX8 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1aA2APX8 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1aA2APX8 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1aA2APX8 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Scn1aA2APX8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Scn1aA2APX8 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1aA2APX8 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1aA2APX8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1aA2APX8 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1aA2APX8 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1aA2APX8 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1aA2APX8 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1aA2APX8 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1aA2APX8 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1aA2APX8 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1aA2APX8 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Scn1aA2APX8 Gm25043-201ENSMUST00000158604 212 ntBASIC13.67□□□□□ -0.22
Scn1aA2APX8 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.67□□□□□ -0.22
Scn1aA2APX8 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.67□□□□□ -0.22
Scn1aA2APX8 Gm8099-201ENSMUST00000200510 742 ntBASIC13.67□□□□□ -0.22
Scn1aA2APX8 Gm6013-201ENSMUST00000212264 699 ntBASIC13.67□□□□□ -0.22
Scn1aA2APX8 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1aA2APX8 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1aA2APX8 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Scn1aA2APX8 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1aA2APX8 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1aA2APX8 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms