Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim17A0A504 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim17A0A504 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Smim17A0A504 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smim17A0A504 BC001981-202ENSMUST00000191393 1545 ntBASIC11.86□□□□□ -0.51
Smim17A0A504 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim17A0A504 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim17A0A504 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.85□□□□□ -0.51
Smim17A0A504 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim17A0A504 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim17A0A504 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim17A0A504 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim17A0A504 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim17A0A504 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim17A0A504 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smim17A0A504 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smim17A0A504 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smim17A0A504 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
Smim17A0A504 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim17A0A504 Gm27300-201ENSMUST00000184085 97 ntBASIC11.85□□□□□ -0.51
Smim17A0A504 Gm27335-201ENSMUST00000184758 97 ntBASIC11.85□□□□□ -0.51
Smim17A0A504 Mir7036b-201ENSMUST00000184791 63 ntBASIC11.85□□□□□ -0.51
Smim17A0A504 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim17A0A504 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smim17A0A504 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim17A0A504 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.85□□□□□ -0.51
Smim17A0A504 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim17A0A504 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.85□□□□□ -0.51
Smim17A0A504 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim17A0A504 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.85□□□□□ -0.51
Smim17A0A504 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.85□□□□□ -0.51
Smim17A0A504 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smim17A0A504 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.85□□□□□ -0.51
Smim17A0A504 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Smim17A0A504 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim17A0A504 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim17A0A504 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smim17A0A504 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim17A0A504 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim17A0A504 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim17A0A504 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Smim17A0A504 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Smim17A0A504 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.84□□□□□ -0.51
Smim17A0A504 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Smim17A0A504 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.84□□□□□ -0.51
Smim17A0A504 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Smim17A0A504 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Smim17A0A504 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 Gm27301-201ENSMUST00000184012 127 ntBASIC11.84□□□□□ -0.51
Smim17A0A504 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.84□□□□□ -0.51
Smim17A0A504 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.84□□□□□ -0.51
Smim17A0A504 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 Gm7461-201ENSMUST00000058918 827 ntBASIC11.84□□□□□ -0.51
Smim17A0A504 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Smim17A0A504 Gm15590-201ENSMUST00000078419 552 ntBASIC11.84□□□□□ -0.51
Smim17A0A504 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Smim17A0A504 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.84□□□□□ -0.51
Smim17A0A504 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Smim17A0A504 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim17A0A504 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim17A0A504 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Smim17A0A504 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.83□□□□□ -0.52
Smim17A0A504 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Smim17A0A504 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim17A0A504 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim17A0A504 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.83□□□□□ -0.52
Smim17A0A504 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smim17A0A504 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim17A0A504 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim17A0A504 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim17A0A504 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.83□□□□□ -0.52
Smim17A0A504 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim17A0A504 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Smim17A0A504 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms