Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Mir1897-201ENSMUST00000122581 272 ntBASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm3436-201ENSMUST00000179930 840 ntBASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Mir7023-201ENSMUST00000185093 64 ntBASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm9229-201ENSMUST00000222777 126 ntBASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm27618-201ENSMUST00000183671 60 ntBASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm27680-201ENSMUST00000184192 160 ntBASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm33320-201ENSMUST00000192232 530 ntBASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm46209-201ENSMUST00000217912 553 ntBASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Shd-206ENSMUST00000225145 998 ntBASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 AC115735.4-201ENSMUST00000227460 1944 ntBASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm5320-201ENSMUST00000207163 1519 ntBASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm44806-201ENSMUST00000205574 2303 ntBASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav6n-6A0A075B6B2 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms