Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Mir8098-201ENSMUST00000184011 137 ntBASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Thap2-203ENSMUST00000218989 527 ntBASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Gm15590-201ENSMUST00000078419 552 ntBASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Gm5989-201ENSMUST00000096092 2077 ntBASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Gm43102-201ENSMUST00000201004 2324 ntBASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Gm42463-201ENSMUST00000198041 4886 ntBASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Gm29741-201ENSMUST00000192667 421 ntBASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Gm21362-201ENSMUST00000194272 928 ntBASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Klk2-ps-201ENSMUST00000205342 571 ntBASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Gm44719-201ENSMUST00000206404 149 ntBASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Gm44608-201ENSMUST00000206827 855 ntBASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Umpk-ps-201ENSMUST00000211897 827 ntBASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 CT025626.1-201ENSMUST00000223735 1455 ntBASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 AC166574.4-201ENSMUST00000227165 1937 ntBASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Gm13410-201ENSMUST00000117058 1415 ntBASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav8-1A0A075B641 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 AC122860.2-201ENSMUST00000217967 2671 ntBASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms