Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7n-5A0A075B604 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7n-5A0A075B604 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7n-5A0A075B604 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7n-5A0A075B604 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7n-5A0A075B604 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav7n-5A0A075B604 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav7n-5A0A075B604 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7n-5A0A075B604 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7n-5A0A075B604 Acot6-202ENSMUST00000222921 3622 ntBASIC10.78□□□□□ -0.68
Trav7n-5A0A075B604 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7n-5A0A075B604 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7n-5A0A075B604 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.78□□□□□ -0.68
Trav7n-5A0A075B604 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.78□□□□□ -0.68
Trav7n-5A0A075B604 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7n-5A0A075B604 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav7n-5A0A075B604 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav7n-5A0A075B604 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.77□□□□□ -0.68
Trav7n-5A0A075B604 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.77□□□□□ -0.68
Trav7n-5A0A075B604 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav7n-5A0A075B604 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav7n-5A0A075B604 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Trav7n-5A0A075B604 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav7n-5A0A075B604 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.77□□□□□ -0.68
Trav7n-5A0A075B604 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC10.77□□□□□ -0.68
Trav7n-5A0A075B604 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav7n-5A0A075B604 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Gm29127-201ENSMUST00000188304 517 ntBASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Gm43818-201ENSMUST00000200605 466 ntBASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav7n-5A0A075B604 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Gm13123-201ENSMUST00000122173 492 ntBASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Gm28693-202ENSMUST00000190758 331 ntBASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-5A0A075B604 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms