Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Gm27989-201ENSMUST00000184721 107 ntBASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Gm45841-201ENSMUST00000207700 164 ntBASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Paupar-201ENSMUST00000194826 3482 ntBASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb3S4R1G7 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Mir6956-201ENSMUST00000183598 62 ntBASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Pck2-205ENSMUST00000226352 2784 ntBASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms