Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Gm13316-201ENSMUST00000140537 691 ntBASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Mir6420-201ENSMUST00000185032 102 ntBASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn8aQ9WTU3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Gm25214-201ENSMUST00000104573 129 ntBASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Gm13297-201ENSMUST00000120205 934 ntBASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Gm18935-201ENSMUST00000212692 664 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms