Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ldb3Q9JKS4 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ldb3Q9JKS4 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ldb3Q9JKS4 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ldb3Q9JKS4 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.92□□□□□ -0.5
Ldb3Q9JKS4 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.92□□□□□ -0.5
Ldb3Q9JKS4 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ldb3Q9JKS4 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ldb3Q9JKS4 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Gm12203-201ENSMUST00000118235 598 ntBASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Gm12209-201ENSMUST00000120089 596 ntBASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Gm13123-201ENSMUST00000122173 492 ntBASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ldb3Q9JKS4 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Gm28693-202ENSMUST00000190758 331 ntBASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Gm37922-201ENSMUST00000195596 455 ntBASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Gm7561-201ENSMUST00000211203 886 ntBASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb3Q9JKS4 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ldb3Q9JKS4 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ldb3Q9JKS4 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Ldb3Q9JKS4 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ldb3Q9JKS4 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.89□□□□□ -0.51
Ldb3Q9JKS4 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms