Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Gm27631-201ENSMUST00000184163 466 ntBASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Gm44771-201ENSMUST00000206975 626 ntBASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgn3Q9DCB1 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Gm2810-201ENSMUST00000118681 990 ntBASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms