Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Gm15770-201ENSMUST00000117498 584 ntBASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Gm43094-201ENSMUST00000196549 921 ntBASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Gm45668-201ENSMUST00000211271 493 ntBASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Gm12485-201ENSMUST00000119641 291 ntBASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Mir6392-201ENSMUST00000184924 108 ntBASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Gm8515-201ENSMUST00000194852 576 ntBASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Gm18018-201ENSMUST00000198273 408 ntBASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shmt2Q9CZN7 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.56□□□□□ -0.4
Shmt2Q9CZN7 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Shmt2Q9CZN7 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.56□□□□□ -0.4
Shmt2Q9CZN7 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.56□□□□□ -0.4
Shmt2Q9CZN7 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shmt2Q9CZN7 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.56□□□□□ -0.4
Shmt2Q9CZN7 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shmt2Q9CZN7 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shmt2Q9CZN7 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shmt2Q9CZN7 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shmt2Q9CZN7 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shmt2Q9CZN7 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shmt2Q9CZN7 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shmt2Q9CZN7 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shmt2Q9CZN7 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shmt2Q9CZN7 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shmt2Q9CZN7 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shmt2Q9CZN7 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shmt2Q9CZN7 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shmt2Q9CZN7 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shmt2Q9CZN7 Gm12341-201ENSMUST00000119724 503 ntBASIC12.56□□□□□ -0.4
Shmt2Q9CZN7 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shmt2Q9CZN7 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.56□□□□□ -0.4
Shmt2Q9CZN7 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 106.4 ms