Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Gm43703-201ENSMUST00000200523 763 ntBASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.44□□□□□ -0.42
Ska1Q9CPV1 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ska1Q9CPV1 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms