Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.82□□□□□ -0.36
Msh4Q99MT2 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msh4Q99MT2 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Msh4Q99MT2 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msh4Q99MT2 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msh4Q99MT2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msh4Q99MT2 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Msh4Q99MT2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msh4Q99MT2 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.82□□□□□ -0.36
Msh4Q99MT2 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msh4Q99MT2 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.82□□□□□ -0.36
Msh4Q99MT2 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.82□□□□□ -0.36
Msh4Q99MT2 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.82□□□□□ -0.36
Msh4Q99MT2 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.82□□□□□ -0.36
Msh4Q99MT2 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Msh4Q99MT2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Msh4Q99MT2 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.82□□□□□ -0.36
Msh4Q99MT2 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msh4Q99MT2 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msh4Q99MT2 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msh4Q99MT2 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Msh4Q99MT2 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msh4Q99MT2 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msh4Q99MT2 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msh4Q99MT2 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msh4Q99MT2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msh4Q99MT2 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msh4Q99MT2 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msh4Q99MT2 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msh4Q99MT2 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msh4Q99MT2 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Msh4Q99MT2 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Msh4Q99MT2 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Msh4Q99MT2 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Msh4Q99MT2 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Gm15371-201ENSMUST00000117057 784 ntBASIC12.81□□□□□ -0.36
Msh4Q99MT2 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Gm38223-201ENSMUST00000194484 695 ntBASIC12.81□□□□□ -0.36
Msh4Q99MT2 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Gm6983-201ENSMUST00000214912 628 ntBASIC12.81□□□□□ -0.36
Msh4Q99MT2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Gm24447-201ENSMUST00000083977 338 ntBASIC12.81□□□□□ -0.36
Msh4Q99MT2 Gm5356-201ENSMUST00000093326 615 ntBASIC12.81□□□□□ -0.36
Msh4Q99MT2 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.81□□□□□ -0.36
Msh4Q99MT2 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msh4Q99MT2 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.81□□□□□ -0.36
Msh4Q99MT2 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msh4Q99MT2 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msh4Q99MT2 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.8□□□□□ -0.36
Msh4Q99MT2 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msh4Q99MT2 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.8□□□□□ -0.36
Msh4Q99MT2 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msh4Q99MT2 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msh4Q99MT2 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msh4Q99MT2 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msh4Q99MT2 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Msh4Q99MT2 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msh4Q99MT2 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Msh4Q99MT2 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Msh4Q99MT2 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Msh4Q99MT2 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msh4Q99MT2 Gm8602-201ENSMUST00000184045 607 ntBASIC12.8□□□□□ -0.36
Msh4Q99MT2 Gm18187-201ENSMUST00000196476 984 ntBASIC12.8□□□□□ -0.36
Msh4Q99MT2 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Msh4Q99MT2 Gm5035-201ENSMUST00000215581 927 ntBASIC12.8□□□□□ -0.36
Msh4Q99MT2 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.8□□□□□ -0.36
Msh4Q99MT2 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msh4Q99MT2 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msh4Q99MT2 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms