Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm7029-201ENSMUST00000173226 450 ntBASIC11.55□□□□□ -0.56
Scrt1Q99M85 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.55□□□□□ -0.56
Scrt1Q99M85 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.55□□□□□ -0.56
Scrt1Q99M85 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.55□□□□□ -0.56
Scrt1Q99M85 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.55□□□□□ -0.56
Scrt1Q99M85 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.55□□□□□ -0.56
Scrt1Q99M85 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.54□□□□□ -0.56
Scrt1Q99M85 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Gm24255-201ENSMUST00000104481 128 ntBASIC11.54□□□□□ -0.56
Scrt1Q99M85 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.54□□□□□ -0.56
Scrt1Q99M85 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.54□□□□□ -0.56
Scrt1Q99M85 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Scrt1Q99M85 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Gm6222-202ENSMUST00000182143 629 ntBASIC11.54□□□□□ -0.56
Scrt1Q99M85 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.54□□□□□ -0.56
Scrt1Q99M85 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.54□□□□□ -0.56
Scrt1Q99M85 Gm27320-201ENSMUST00000184892 109 ntBASIC11.54□□□□□ -0.56
Scrt1Q99M85 Gm6621-201ENSMUST00000193251 772 ntBASIC11.54□□□□□ -0.56
Scrt1Q99M85 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scrt1Q99M85 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.54□□□□□ -0.56
Scrt1Q99M85 Gm8227-201ENSMUST00000223306 571 ntBASIC11.54□□□□□ -0.56
Scrt1Q99M85 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.54□□□□□ -0.56
Scrt1Q99M85 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Gm10146-201ENSMUST00000072739 309 ntBASIC11.54□□□□□ -0.56
Scrt1Q99M85 Gm24447-201ENSMUST00000083977 338 ntBASIC11.54□□□□□ -0.56
Scrt1Q99M85 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.54□□□□□ -0.56
Scrt1Q99M85 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Scrt1Q99M85 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.53□□□□□ -0.56
Scrt1Q99M85 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Gm38158-201ENSMUST00000194617 339 ntBASIC11.53□□□□□ -0.56
Scrt1Q99M85 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Scrt1Q99M85 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms