Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 Mir686-201ENSMUST00000102174 109 ntBASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 Gm29705-201ENSMUST00000212598 474 ntBASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pcdha9Q91Y11 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.96□□□□□ -0.18
Pcdha9Q91Y11 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdha9Q91Y11 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.96□□□□□ -0.18
Pcdha9Q91Y11 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Pcdha9Q91Y11 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdha9Q91Y11 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.96□□□□□ -0.18
Pcdha9Q91Y11 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdha9Q91Y11 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdha9Q91Y11 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdha9Q91Y11 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Gm13369-201ENSMUST00000119442 987 ntBASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Gm2231-201ENSMUST00000125661 612 ntBASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha9Q91Y11 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms