Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Gm14928-201ENSMUST00000120198 477 ntBASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Gm23984-201ENSMUST00000157139 203 ntBASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.66□□□□□ -0.22
Pcdhb1Q91Y08 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms