Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Gm3344-201ENSMUST00000169610 603 ntBASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Gm20854-201ENSMUST00000178889 1002 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Gm8872-201ENSMUST00000197475 1341 ntBASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 CT009713.1-201ENSMUST00000224828 853 ntBASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Gm42941-201ENSMUST00000200347 1321 ntBASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Gm17837-201ENSMUST00000186435 985 ntBASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Gm17790-201ENSMUST00000191545 1228 ntBASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Gm43316-201ENSMUST00000197252 1295 ntBASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Gm43974-201ENSMUST00000205080 684 ntBASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb3Q91XZ7 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms