Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.77□□□□□ -0.37
Pcdhga11Q91XY8 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga11Q91XY8 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga11Q91XY8 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga11Q91XY8 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga11Q91XY8 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhga11Q91XY8 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga11Q91XY8 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga11Q91XY8 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga11Q91XY8 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga11Q91XY8 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga11Q91XY8 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga11Q91XY8 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga11Q91XY8 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga11Q91XY8 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga11Q91XY8 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Gm11424-201ENSMUST00000121929 829 ntBASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Gm5745-201ENSMUST00000183748 313 ntBASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Gm6218-201ENSMUST00000219812 628 ntBASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga11Q91XY8 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Gm26464-201ENSMUST00000157094 305 ntBASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms