Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TraipQ8VIG6 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TraipQ8VIG6 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TraipQ8VIG6 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TraipQ8VIG6 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
TraipQ8VIG6 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14□□□□□ -0.17
TraipQ8VIG6 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TraipQ8VIG6 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TraipQ8VIG6 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TraipQ8VIG6 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TraipQ8VIG6 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14□□□□□ -0.17
TraipQ8VIG6 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14□□□□□ -0.17
TraipQ8VIG6 Gm13342-201ENSMUST00000121055 207 ntBASIC14□□□□□ -0.17
TraipQ8VIG6 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14□□□□□ -0.17
TraipQ8VIG6 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14□□□□□ -0.17
TraipQ8VIG6 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14□□□□□ -0.17
TraipQ8VIG6 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14□□□□□ -0.17
TraipQ8VIG6 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14□□□□□ -0.17
TraipQ8VIG6 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14□□□□□ -0.17
TraipQ8VIG6 Olfr582-201ENSMUST00000098212 960 ntBASIC14□□□□□ -0.17
TraipQ8VIG6 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TraipQ8VIG6 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TraipQ8VIG6 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TraipQ8VIG6 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TraipQ8VIG6 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TraipQ8VIG6 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TraipQ8VIG6 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TraipQ8VIG6 Gm9877-201ENSMUST00000064271 2627 ntBASIC14□□□□□ -0.17
TraipQ8VIG6 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TraipQ8VIG6 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TraipQ8VIG6 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TraipQ8VIG6 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14□□□□□ -0.17
TraipQ8VIG6 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TraipQ8VIG6 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TraipQ8VIG6 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TraipQ8VIG6 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TraipQ8VIG6 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TraipQ8VIG6 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TraipQ8VIG6 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TraipQ8VIG6 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TraipQ8VIG6 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC13.99□□□□□ -0.17
TraipQ8VIG6 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TraipQ8VIG6 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TraipQ8VIG6 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TraipQ8VIG6 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TraipQ8VIG6 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TraipQ8VIG6 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.99□□□□□ -0.17
TraipQ8VIG6 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TraipQ8VIG6 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TraipQ8VIG6 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
TraipQ8VIG6 Gm6023-201ENSMUST00000118217 606 ntBASIC13.99□□□□□ -0.17
TraipQ8VIG6 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
TraipQ8VIG6 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.99□□□□□ -0.17
TraipQ8VIG6 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.99□□□□□ -0.17
TraipQ8VIG6 Gm43822-201ENSMUST00000200285 476 ntBASIC13.99□□□□□ -0.17
TraipQ8VIG6 Gm7783-201ENSMUST00000204795 781 ntBASIC13.99□□□□□ -0.17
TraipQ8VIG6 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.99□□□□□ -0.17
TraipQ8VIG6 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.99□□□□□ -0.17
TraipQ8VIG6 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TraipQ8VIG6 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
TraipQ8VIG6 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
TraipQ8VIG6 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TraipQ8VIG6 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TraipQ8VIG6 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TraipQ8VIG6 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
TraipQ8VIG6 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TraipQ8VIG6 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TraipQ8VIG6 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TraipQ8VIG6 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TraipQ8VIG6 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TraipQ8VIG6 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TraipQ8VIG6 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TraipQ8VIG6 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TraipQ8VIG6 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TraipQ8VIG6 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TraipQ8VIG6 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
TraipQ8VIG6 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TraipQ8VIG6 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.98□□□□□ -0.17
TraipQ8VIG6 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TraipQ8VIG6 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.98□□□□□ -0.17
TraipQ8VIG6 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.98□□□□□ -0.17
TraipQ8VIG6 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.98□□□□□ -0.17
TraipQ8VIG6 Gm27516-201ENSMUST00000184237 98 ntBASIC13.98□□□□□ -0.17
TraipQ8VIG6 Gm38114-201ENSMUST00000191877 1232 ntBASIC13.98□□□□□ -0.17
TraipQ8VIG6 Gm43084-201ENSMUST00000200696 947 ntBASIC13.98□□□□□ -0.17
TraipQ8VIG6 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TraipQ8VIG6 Gm21769-201ENSMUST00000211922 111 ntBASIC13.98□□□□□ -0.17
TraipQ8VIG6 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TraipQ8VIG6 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.98□□□□□ -0.17
TraipQ8VIG6 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.98□□□□□ -0.17
TraipQ8VIG6 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.98□□□□□ -0.17
TraipQ8VIG6 Gm25007-201ENSMUST00000083808 133 ntBASIC13.98□□□□□ -0.17
TraipQ8VIG6 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TraipQ8VIG6 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TraipQ8VIG6 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TraipQ8VIG6 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TraipQ8VIG6 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
TraipQ8VIG6 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TraipQ8VIG6 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms