Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp7Q8R1T1 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp7Q8R1T1 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp7Q8R1T1 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp7Q8R1T1 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Chmp7Q8R1T1 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp7Q8R1T1 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp7Q8R1T1 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Gm31256-201ENSMUST00000194705 506 ntBASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp7Q8R1T1 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp7Q8R1T1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp7Q8R1T1 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp7Q8R1T1 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC16.74■□□□□ 0.27
Chmp7Q8R1T1 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp7Q8R1T1 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp7Q8R1T1 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Chmp7Q8R1T1 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp7Q8R1T1 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp7Q8R1T1 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp7Q8R1T1 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC16.74■□□□□ 0.27
Chmp7Q8R1T1 Gm9061-201ENSMUST00000182707 1006 ntBASIC16.74■□□□□ 0.27
Chmp7Q8R1T1 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC16.74■□□□□ 0.27
Chmp7Q8R1T1 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC16.74■□□□□ 0.27
Chmp7Q8R1T1 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC16.74■□□□□ 0.27
Chmp7Q8R1T1 Mettl6-204ENSMUST00000227595 1027 ntBASIC16.74■□□□□ 0.27
Chmp7Q8R1T1 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp7Q8R1T1 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC16.74■□□□□ 0.27
Chmp7Q8R1T1 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.74■□□□□ 0.27
Chmp7Q8R1T1 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp7Q8R1T1 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp7Q8R1T1 Gm8228-201ENSMUST00000189949 2192 ntBASIC16.74■□□□□ 0.27
Chmp7Q8R1T1 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp7Q8R1T1 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp7Q8R1T1 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 Gm12997-201ENSMUST00000120207 640 ntBASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 Gm12715-201ENSMUST00000121430 1128 ntBASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 Mir7221-201ENSMUST00000184009 72 ntBASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 Gm43416-201ENSMUST00000201916 1015 ntBASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 Gm44772-201ENSMUST00000207623 1191 ntBASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 AC166051.1-201ENSMUST00000214313 210 ntBASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 Gm19221-201ENSMUST00000221827 1477 ntBASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp7Q8R1T1 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp7Q8R1T1 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC16.72■□□□□ 0.27
Chmp7Q8R1T1 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp7Q8R1T1 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp7Q8R1T1 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms