Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.42□□□□□ -0.42
Clrn1Q8K445 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.41□□□□□ -0.42
Clrn1Q8K445 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.41□□□□□ -0.42
Clrn1Q8K445 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.41□□□□□ -0.42
Clrn1Q8K445 Gm18041-201ENSMUST00000218210 618 ntBASIC12.41□□□□□ -0.42
Clrn1Q8K445 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.41□□□□□ -0.42
Clrn1Q8K445 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.41□□□□□ -0.42
Clrn1Q8K445 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn1Q8K445 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Clrn1Q8K445 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.4□□□□□ -0.42
Clrn1Q8K445 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn1Q8K445 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn1Q8K445 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.4□□□□□ -0.42
Clrn1Q8K445 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Gm12490-201ENSMUST00000120255 560 ntBASIC12.4□□□□□ -0.42
Clrn1Q8K445 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Clrn1Q8K445 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn1Q8K445 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.4□□□□□ -0.42
Clrn1Q8K445 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Gm38671-201ENSMUST00000200573 130 ntBASIC12.4□□□□□ -0.42
Clrn1Q8K445 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.4□□□□□ -0.42
Clrn1Q8K445 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Gm8463-201ENSMUST00000208573 613 ntBASIC12.4□□□□□ -0.42
Clrn1Q8K445 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Gm18473-201ENSMUST00000220543 868 ntBASIC12.4□□□□□ -0.42
Clrn1Q8K445 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.4□□□□□ -0.42
Clrn1Q8K445 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.4□□□□□ -0.42
Clrn1Q8K445 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms