Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rab11fip3Q8CHD8 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rab11fip3Q8CHD8 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rab11fip3Q8CHD8 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rab11fip3Q8CHD8 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rab11fip3Q8CHD8 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rab11fip3Q8CHD8 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rab11fip3Q8CHD8 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rab11fip3Q8CHD8 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rab11fip3Q8CHD8 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC16.97■□□□□ 0.31
Rab11fip3Q8CHD8 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rab11fip3Q8CHD8 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rab11fip3Q8CHD8 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rab11fip3Q8CHD8 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rab11fip3Q8CHD8 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rab11fip3Q8CHD8 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rab11fip3Q8CHD8 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rab11fip3Q8CHD8 Gm10434-201ENSMUST00000101158 471 ntBASIC16.96■□□□□ 0.31
Rab11fip3Q8CHD8 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC16.96■□□□□ 0.31
Rab11fip3Q8CHD8 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.96■□□□□ 0.31
Rab11fip3Q8CHD8 Gm11658-201ENSMUST00000120913 1008 ntBASIC16.96■□□□□ 0.31
Rab11fip3Q8CHD8 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC16.96■□□□□ 0.31
Rab11fip3Q8CHD8 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC16.96■□□□□ 0.31
Rab11fip3Q8CHD8 Gm2467-201ENSMUST00000182266 1010 ntBASIC16.96■□□□□ 0.31
Rab11fip3Q8CHD8 Gm6981-201ENSMUST00000182467 1008 ntBASIC16.96■□□□□ 0.31
Rab11fip3Q8CHD8 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC16.96■□□□□ 0.31
Rab11fip3Q8CHD8 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rab11fip3Q8CHD8 Gm8227-201ENSMUST00000223306 571 ntBASIC16.96■□□□□ 0.31
Rab11fip3Q8CHD8 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC16.96■□□□□ 0.31
Rab11fip3Q8CHD8 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Rab11fip3Q8CHD8 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC16.96■□□□□ 0.31
Rab11fip3Q8CHD8 Gm44775-201ENSMUST00000207266 1456 ntBASIC16.96■□□□□ 0.31
Rab11fip3Q8CHD8 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Rab11fip3Q8CHD8 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rab11fip3Q8CHD8 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rab11fip3Q8CHD8 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rab11fip3Q8CHD8 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rab11fip3Q8CHD8 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rab11fip3Q8CHD8 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC16.96■□□□□ 0.3
Rab11fip3Q8CHD8 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Rab11fip3Q8CHD8 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Gm5637-201ENSMUST00000153890 1119 ntBASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Gm37489-201ENSMUST00000191883 159 ntBASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Gm7783-201ENSMUST00000204795 781 ntBASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Gm10608-202ENSMUST00000213924 676 ntBASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab11fip3Q8CHD8 Matn2-206ENSMUST00000228570 2798 ntBASIC16.94■□□□□ 0.3
Rab11fip3Q8CHD8 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rab11fip3Q8CHD8 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rab11fip3Q8CHD8 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rab11fip3Q8CHD8 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rab11fip3Q8CHD8 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rab11fip3Q8CHD8 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Rab11fip3Q8CHD8 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rab11fip3Q8CHD8 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rab11fip3Q8CHD8 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rab11fip3Q8CHD8 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rab11fip3Q8CHD8 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Rab11fip3Q8CHD8 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rab11fip3Q8CHD8 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rab11fip3Q8CHD8 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Rab11fip3Q8CHD8 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC16.94■□□□□ 0.3
Rab11fip3Q8CHD8 Gm12291-201ENSMUST00000121627 311 ntBASIC16.94■□□□□ 0.3
Rab11fip3Q8CHD8 Gm8738-201ENSMUST00000172606 329 ntBASIC16.94■□□□□ 0.3
Rab11fip3Q8CHD8 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rab11fip3Q8CHD8 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC16.94■□□□□ 0.3
Rab11fip3Q8CHD8 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Rab11fip3Q8CHD8 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rab11fip3Q8CHD8 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms