Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Gm11591-201ENSMUST00000120063 702 ntBASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Gm17208-201ENSMUST00000168388 535 ntBASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rdh1Q8CGV4 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Gm11793-201ENSMUST00000120433 981 ntBASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Gm7809-201ENSMUST00000153199 742 ntBASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Gm43179-201ENSMUST00000198797 275 ntBASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rdh1Q8CGV4 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Gm19931-201ENSMUST00000198920 368 ntBASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rdh1Q8CGV4 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms