Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc5Q8CG46 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc5Q8CG46 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC16.26■□□□□ 0.19
Smc5Q8CG46 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc5Q8CG46 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smc5Q8CG46 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc5Q8CG46 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc5Q8CG46 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smc5Q8CG46 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc5Q8CG46 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smc5Q8CG46 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc5Q8CG46 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc5Q8CG46 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc5Q8CG46 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc5Q8CG46 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Smc5Q8CG46 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc5Q8CG46 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc5Q8CG46 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc5Q8CG46 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smc5Q8CG46 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC16.25■□□□□ 0.19
Smc5Q8CG46 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC16.25■□□□□ 0.19
Smc5Q8CG46 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc5Q8CG46 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc5Q8CG46 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Smc5Q8CG46 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smc5Q8CG46 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.25■□□□□ 0.19
Smc5Q8CG46 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc5Q8CG46 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Smc5Q8CG46 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC16.25■□□□□ 0.19
Smc5Q8CG46 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC16.25■□□□□ 0.19
Smc5Q8CG46 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc5Q8CG46 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc5Q8CG46 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc5Q8CG46 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Smc5Q8CG46 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc5Q8CG46 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc5Q8CG46 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smc5Q8CG46 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smc5Q8CG46 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc5Q8CG46 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smc5Q8CG46 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc5Q8CG46 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc5Q8CG46 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc5Q8CG46 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Smc5Q8CG46 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc5Q8CG46 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc5Q8CG46 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc5Q8CG46 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc5Q8CG46 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc5Q8CG46 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smc5Q8CG46 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Smc5Q8CG46 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Smc5Q8CG46 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Smc5Q8CG46 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc5Q8CG46 Gm12151-201ENSMUST00000121374 290 ntBASIC16.24■□□□□ 0.19
Smc5Q8CG46 Gm28760-201ENSMUST00000185995 736 ntBASIC16.24■□□□□ 0.19
Smc5Q8CG46 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Smc5Q8CG46 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.24■□□□□ 0.19
Smc5Q8CG46 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC16.24■□□□□ 0.19
Smc5Q8CG46 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc5Q8CG46 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC16.24■□□□□ 0.19
Smc5Q8CG46 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Smc5Q8CG46 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc5Q8CG46 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smc5Q8CG46 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.24■□□□□ 0.19
Smc5Q8CG46 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC16.24■□□□□ 0.19
Smc5Q8CG46 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc5Q8CG46 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc5Q8CG46 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc5Q8CG46 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC16.23■□□□□ 0.19
Smc5Q8CG46 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc5Q8CG46 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc5Q8CG46 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc5Q8CG46 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc5Q8CG46 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc5Q8CG46 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC16.23■□□□□ 0.19
Smc5Q8CG46 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC16.23■□□□□ 0.19
Smc5Q8CG46 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smc5Q8CG46 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc5Q8CG46 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc5Q8CG46 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc5Q8CG46 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.23■□□□□ 0.19
Smc5Q8CG46 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc5Q8CG46 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smc5Q8CG46 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC16.23■□□□□ 0.19
Smc5Q8CG46 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc5Q8CG46 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc5Q8CG46 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smc5Q8CG46 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc5Q8CG46 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc5Q8CG46 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc5Q8CG46 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc5Q8CG46 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.22■□□□□ 0.19
Smc5Q8CG46 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Smc5Q8CG46 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC16.22■□□□□ 0.19
Smc5Q8CG46 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc5Q8CG46 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smc5Q8CG46 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smc5Q8CG46 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc5Q8CG46 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms