Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Lrif1Q8CDD9 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Lrif1Q8CDD9 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.02□□□□□ -0.33
Lrif1Q8CDD9 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.02□□□□□ -0.33
Lrif1Q8CDD9 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lrif1Q8CDD9 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lrif1Q8CDD9 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lrif1Q8CDD9 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lrif1Q8CDD9 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lrif1Q8CDD9 Syt7-204ENSMUST00000223586 1344 ntBASIC13.02□□□□□ -0.33
Lrif1Q8CDD9 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lrif1Q8CDD9 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lrif1Q8CDD9 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lrif1Q8CDD9 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Lrif1Q8CDD9 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lrif1Q8CDD9 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lrif1Q8CDD9 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lrif1Q8CDD9 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lrif1Q8CDD9 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lrif1Q8CDD9 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lrif1Q8CDD9 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lrif1Q8CDD9 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Lrif1Q8CDD9 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lrif1Q8CDD9 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lrif1Q8CDD9 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Lrif1Q8CDD9 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Lrif1Q8CDD9 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Lrif1Q8CDD9 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lrif1Q8CDD9 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrif1Q8CDD9 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrif1Q8CDD9 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrif1Q8CDD9 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13□□□□□ -0.33
Lrif1Q8CDD9 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrif1Q8CDD9 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13□□□□□ -0.33
Lrif1Q8CDD9 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13□□□□□ -0.33
Lrif1Q8CDD9 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrif1Q8CDD9 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lrif1Q8CDD9 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Lrif1Q8CDD9 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Lrif1Q8CDD9 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrif1Q8CDD9 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Lrif1Q8CDD9 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lrif1Q8CDD9 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Lrif1Q8CDD9 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lrif1Q8CDD9 Mir874-201ENSMUST00000104769 76 ntBASIC13□□□□□ -0.33
Lrif1Q8CDD9 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lrif1Q8CDD9 Gm7488-201ENSMUST00000117148 684 ntBASIC13□□□□□ -0.33
Lrif1Q8CDD9 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Lrif1Q8CDD9 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13□□□□□ -0.33
Lrif1Q8CDD9 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13□□□□□ -0.33
Lrif1Q8CDD9 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Lrif1Q8CDD9 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lrif1Q8CDD9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lrif1Q8CDD9 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrif1Q8CDD9 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrif1Q8CDD9 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrif1Q8CDD9 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms