Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim9Q8C7M3 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.5□□□□□ -0.09
Trim9Q8C7M3 Proscos-202ENSMUST00000178990 666 ntBASIC14.5□□□□□ -0.09
Trim9Q8C7M3 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim9Q8C7M3 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Trim9Q8C7M3 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim9Q8C7M3 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim9Q8C7M3 Gm16372-201ENSMUST00000073088 450 ntBASIC14.5□□□□□ -0.09
Trim9Q8C7M3 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trim9Q8C7M3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim9Q8C7M3 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim9Q8C7M3 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim9Q8C7M3 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim9Q8C7M3 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim9Q8C7M3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim9Q8C7M3 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim9Q8C7M3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim9Q8C7M3 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim9Q8C7M3 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim9Q8C7M3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trim9Q8C7M3 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim9Q8C7M3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim9Q8C7M3 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim9Q8C7M3 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim9Q8C7M3 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim9Q8C7M3 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim9Q8C7M3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim9Q8C7M3 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim9Q8C7M3 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.48□□□□□ -0.09
Trim9Q8C7M3 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.48□□□□□ -0.09
Trim9Q8C7M3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim9Q8C7M3 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trim9Q8C7M3 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim9Q8C7M3 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim9Q8C7M3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim9Q8C7M3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim9Q8C7M3 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim9Q8C7M3 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim9Q8C7M3 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim9Q8C7M3 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim9Q8C7M3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trim9Q8C7M3 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim9Q8C7M3 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim9Q8C7M3 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim9Q8C7M3 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trim9Q8C7M3 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Mir686-201ENSMUST00000102174 109 ntBASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Gm10156-201ENSMUST00000122364 462 ntBASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Gm9794-201ENSMUST00000202370 423 ntBASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim9Q8C7M3 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms