Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cps1Q8C196 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC17.33■□□□□ 0.36
Cps1Q8C196 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cps1Q8C196 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cps1Q8C196 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cps1Q8C196 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cps1Q8C196 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cps1Q8C196 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cps1Q8C196 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cps1Q8C196 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cps1Q8C196 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cps1Q8C196 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cps1Q8C196 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Cps1Q8C196 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Cps1Q8C196 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cps1Q8C196 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cps1Q8C196 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cps1Q8C196 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cps1Q8C196 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC17.32■□□□□ 0.36
Cps1Q8C196 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cps1Q8C196 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC17.32■□□□□ 0.36
Cps1Q8C196 Gm27530-201ENSMUST00000184096 98 ntBASIC17.32■□□□□ 0.36
Cps1Q8C196 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cps1Q8C196 Gm17827-201ENSMUST00000211825 742 ntBASIC17.32■□□□□ 0.36
Cps1Q8C196 Olfr1347-205ENSMUST00000220413 964 ntBASIC17.32■□□□□ 0.36
Cps1Q8C196 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC17.32■□□□□ 0.36
Cps1Q8C196 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC17.32■□□□□ 0.36
Cps1Q8C196 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC17.32■□□□□ 0.36
Cps1Q8C196 CT009713.8-201ENSMUST00000225448 560 ntBASIC17.32■□□□□ 0.36
Cps1Q8C196 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cps1Q8C196 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cps1Q8C196 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC17.32■□□□□ 0.36
Cps1Q8C196 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cps1Q8C196 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cps1Q8C196 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cps1Q8C196 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cps1Q8C196 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cps1Q8C196 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cps1Q8C196 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cps1Q8C196 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cps1Q8C196 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Cps1Q8C196 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cps1Q8C196 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cps1Q8C196 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cps1Q8C196 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cps1Q8C196 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cps1Q8C196 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
Cps1Q8C196 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cps1Q8C196 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cps1Q8C196 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cps1Q8C196 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC17.31■□□□□ 0.36
Cps1Q8C196 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cps1Q8C196 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC17.31■□□□□ 0.36
Cps1Q8C196 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cps1Q8C196 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cps1Q8C196 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cps1Q8C196 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
Cps1Q8C196 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cps1Q8C196 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC17.31■□□□□ 0.36
Cps1Q8C196 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cps1Q8C196 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cps1Q8C196 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cps1Q8C196 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cps1Q8C196 Gm44999-201ENSMUST00000207456 1493 ntBASIC17.31■□□□□ 0.36
Cps1Q8C196 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC17.31■□□□□ 0.36
Cps1Q8C196 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Cps1Q8C196 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cps1Q8C196 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cps1Q8C196 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC17.31■□□□□ 0.36
Cps1Q8C196 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cps1Q8C196 Gm7851-201ENSMUST00000117574 323 ntBASIC17.31■□□□□ 0.36
Cps1Q8C196 Gm17391-201ENSMUST00000171036 126 ntBASIC17.31■□□□□ 0.36
Cps1Q8C196 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cps1Q8C196 Gm43916-201ENSMUST00000205062 967 ntBASIC17.31■□□□□ 0.36
Cps1Q8C196 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC17.31■□□□□ 0.36
Cps1Q8C196 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cps1Q8C196 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cps1Q8C196 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cps1Q8C196 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cps1Q8C196 Gm9279-201ENSMUST00000223175 1606 ntBASIC17.31■□□□□ 0.36
Cps1Q8C196 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cps1Q8C196 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cps1Q8C196 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC17.3■□□□□ 0.36
Cps1Q8C196 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cps1Q8C196 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cps1Q8C196 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cps1Q8C196 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cps1Q8C196 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cps1Q8C196 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Cps1Q8C196 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cps1Q8C196 Gm24934-201ENSMUST00000103764 111 ntBASIC17.3■□□□□ 0.36
Cps1Q8C196 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cps1Q8C196 Gm11989-201ENSMUST00000117240 672 ntBASIC17.3■□□□□ 0.36
Cps1Q8C196 Gm11362-201ENSMUST00000118838 850 ntBASIC17.3■□□□□ 0.36
Cps1Q8C196 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC17.3■□□□□ 0.36
Cps1Q8C196 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC17.3■□□□□ 0.36
Cps1Q8C196 Gm19459-201ENSMUST00000176240 835 ntBASIC17.3■□□□□ 0.36
Cps1Q8C196 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC17.3■□□□□ 0.36
Cps1Q8C196 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cps1Q8C196 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms