Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Sh3rf3Q8C120 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Sh3rf3Q8C120 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf3Q8C120 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf3Q8C120 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf3Q8C120 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf3Q8C120 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf3Q8C120 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Sh3rf3Q8C120 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf3Q8C120 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf3Q8C120 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf3Q8C120 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf3Q8C120 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.72□□□□□ -0.21
Sh3rf3Q8C120 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf3Q8C120 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf3Q8C120 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf3Q8C120 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3rf3Q8C120 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sh3rf3Q8C120 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Sh3rf3Q8C120 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3rf3Q8C120 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Sh3rf3Q8C120 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3rf3Q8C120 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Sh3rf3Q8C120 Gm15371-201ENSMUST00000117057 784 ntBASIC13.71□□□□□ -0.21
Sh3rf3Q8C120 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3rf3Q8C120 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.71□□□□□ -0.21
Sh3rf3Q8C120 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Sh3rf3Q8C120 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3rf3Q8C120 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3rf3Q8C120 Gm28911-201ENSMUST00000188837 117 ntBASIC13.71□□□□□ -0.21
Sh3rf3Q8C120 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.71□□□□□ -0.21
Sh3rf3Q8C120 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.71□□□□□ -0.21
Sh3rf3Q8C120 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3rf3Q8C120 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3rf3Q8C120 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3rf3Q8C120 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Sh3rf3Q8C120 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.71□□□□□ -0.22
Sh3rf3Q8C120 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Sh3rf3Q8C120 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sh3rf3Q8C120 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sh3rf3Q8C120 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sh3rf3Q8C120 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.71□□□□□ -0.22
Sh3rf3Q8C120 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.71□□□□□ -0.22
Sh3rf3Q8C120 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sh3rf3Q8C120 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Mir7221-201ENSMUST00000184009 72 ntBASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Sh3rf3Q8C120 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Gm12928-201ENSMUST00000117115 573 ntBASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Gm27701-201ENSMUST00000184498 110 ntBASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Gm8515-201ENSMUST00000194852 576 ntBASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Gm8463-201ENSMUST00000208573 613 ntBASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf3Q8C120 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 904.9 ms