Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Usp47Q8BY87 AC159896.2-201ENSMUST00000214753 269 ntBASIC18.47■□□□□ 0.55
Usp47Q8BY87 AC154319.1-201ENSMUST00000216330 312 ntBASIC18.47■□□□□ 0.55
Usp47Q8BY87 AL589735.1-201ENSMUST00000224353 270 ntBASIC18.47■□□□□ 0.55
Usp47Q8BY87 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Usp47Q8BY87 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Usp47Q8BY87 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Usp47Q8BY87 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Usp47Q8BY87 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Usp47Q8BY87 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Usp47Q8BY87 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp47Q8BY87 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp47Q8BY87 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC18.47■□□□□ 0.55
Usp47Q8BY87 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Usp47Q8BY87 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Usp47Q8BY87 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Usp47Q8BY87 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Usp47Q8BY87 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp47Q8BY87 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp47Q8BY87 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp47Q8BY87 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp47Q8BY87 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp47Q8BY87 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC18.46■□□□□ 0.55
Usp47Q8BY87 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp47Q8BY87 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Usp47Q8BY87 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC18.46■□□□□ 0.55
Usp47Q8BY87 Gm8801-201ENSMUST00000173255 1064 ntBASIC18.46■□□□□ 0.55
Usp47Q8BY87 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC18.46■□□□□ 0.55
Usp47Q8BY87 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Usp47Q8BY87 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Usp47Q8BY87 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Usp47Q8BY87 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Usp47Q8BY87 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp47Q8BY87 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Usp47Q8BY87 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp47Q8BY87 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC18.46■□□□□ 0.55
Usp47Q8BY87 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp47Q8BY87 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp47Q8BY87 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp47Q8BY87 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Usp47Q8BY87 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp47Q8BY87 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp47Q8BY87 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp47Q8BY87 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Usp47Q8BY87 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp47Q8BY87 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp47Q8BY87 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp47Q8BY87 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp47Q8BY87 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Usp47Q8BY87 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC18.46■□□□□ 0.54
Usp47Q8BY87 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Usp47Q8BY87 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC18.45■□□□□ 0.54
Usp47Q8BY87 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp47Q8BY87 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp47Q8BY87 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Usp47Q8BY87 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Usp47Q8BY87 Gm13316-201ENSMUST00000140537 691 ntBASIC18.45■□□□□ 0.54
Usp47Q8BY87 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Usp47Q8BY87 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Usp47Q8BY87 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC18.45■□□□□ 0.54
Usp47Q8BY87 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC18.45■□□□□ 0.54
Usp47Q8BY87 Gm23363-201ENSMUST00000175024 79 ntBASIC18.45■□□□□ 0.54
Usp47Q8BY87 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC18.45■□□□□ 0.54
Usp47Q8BY87 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp47Q8BY87 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Usp47Q8BY87 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp47Q8BY87 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Usp47Q8BY87 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp47Q8BY87 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp47Q8BY87 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Usp47Q8BY87 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp47Q8BY87 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC18.45■□□□□ 0.54
Usp47Q8BY87 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp47Q8BY87 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp47Q8BY87 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Usp47Q8BY87 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp47Q8BY87 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp47Q8BY87 Gm45638-201ENSMUST00000211507 2878 ntBASIC18.45■□□□□ 0.54
Usp47Q8BY87 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp47Q8BY87 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Usp47Q8BY87 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC18.44■□□□□ 0.54
Usp47Q8BY87 Mir1247-201ENSMUST00000116706 82 ntBASIC18.44■□□□□ 0.54
Usp47Q8BY87 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Usp47Q8BY87 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp47Q8BY87 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Usp47Q8BY87 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC18.44■□□□□ 0.54
Usp47Q8BY87 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC18.44■□□□□ 0.54
Usp47Q8BY87 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Usp47Q8BY87 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp47Q8BY87 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Usp47Q8BY87 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Usp47Q8BY87 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp47Q8BY87 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp47Q8BY87 Gm37691-201ENSMUST00000192147 2573 ntBASIC18.44■□□□□ 0.54
Usp47Q8BY87 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp47Q8BY87 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp47Q8BY87 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp47Q8BY87 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp47Q8BY87 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Usp47Q8BY87 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms