Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm18624-201ENSMUST00000220966 658 ntBASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Gm6180-201ENSMUST00000065243 498 ntBASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Gm5745-201ENSMUST00000183748 313 ntBASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
Trerf1Q8BXJ2 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Gm12490-201ENSMUST00000120255 560 ntBASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Gm27772-201ENSMUST00000184900 187 ntBASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trerf1Q8BXJ2 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trerf1Q8BXJ2 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms