Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ube3dQ8BX13 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ube3dQ8BX13 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.71□□□□□ -0.53
Ube3dQ8BX13 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Ube3dQ8BX13 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ube3dQ8BX13 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.71□□□□□ -0.53
Ube3dQ8BX13 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.71□□□□□ -0.53
Ube3dQ8BX13 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ube3dQ8BX13 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ube3dQ8BX13 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ube3dQ8BX13 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Ube3dQ8BX13 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ube3dQ8BX13 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ube3dQ8BX13 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.71□□□□□ -0.53
Ube3dQ8BX13 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ube3dQ8BX13 Gm15429-201ENSMUST00000151268 798 ntBASIC11.71□□□□□ -0.53
Ube3dQ8BX13 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.71□□□□□ -0.53
Ube3dQ8BX13 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.71□□□□□ -0.53
Ube3dQ8BX13 Gm27892-201ENSMUST00000185017 106 ntBASIC11.71□□□□□ -0.53
Ube3dQ8BX13 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC11.71□□□□□ -0.53
Ube3dQ8BX13 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ube3dQ8BX13 Gm5035-201ENSMUST00000215581 927 ntBASIC11.71□□□□□ -0.53
Ube3dQ8BX13 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ube3dQ8BX13 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ube3dQ8BX13 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ube3dQ8BX13 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ube3dQ8BX13 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ube3dQ8BX13 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ube3dQ8BX13 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.71□□□□□ -0.54
Ube3dQ8BX13 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.54
Ube3dQ8BX13 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ube3dQ8BX13 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ube3dQ8BX13 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Ube3dQ8BX13 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Ube3dQ8BX13 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ube3dQ8BX13 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ube3dQ8BX13 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ube3dQ8BX13 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.71□□□□□ -0.54
Ube3dQ8BX13 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ube3dQ8BX13 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ube3dQ8BX13 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Pck2-205ENSMUST00000226352 2784 ntBASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 AC132260.2-201ENSMUST00000224482 344 ntBASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube3dQ8BX13 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms