Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap1Q8BTW8 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.5□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm6013-201ENSMUST00000212264 699 ntBASIC12.5□□□□□ -0.41
Cdk5rap1Q8BTW8 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap1Q8BTW8 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap1Q8BTW8 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Cdk5rap1Q8BTW8 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap1Q8BTW8 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cdk5rap1Q8BTW8 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.5□□□□□ -0.41
Cdk5rap1Q8BTW8 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap1Q8BTW8 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap1Q8BTW8 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap1Q8BTW8 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap1Q8BTW8 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap1Q8BTW8 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap1Q8BTW8 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap1Q8BTW8 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap1Q8BTW8 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap1Q8BTW8 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap1Q8BTW8 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cdk5rap1Q8BTW8 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap1Q8BTW8 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap1Q8BTW8 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Cdk5rap1Q8BTW8 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Cdk5rap1Q8BTW8 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cdk5rap1Q8BTW8 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap1Q8BTW8 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm26185-201ENSMUST00000157692 266 ntBASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm25927-201ENSMUST00000175058 117 ntBASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm6458-201ENSMUST00000211573 635 ntBASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk5rap1Q8BTW8 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Mir874-201ENSMUST00000104769 76 ntBASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms