Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC10.82□□□□□ -0.68
Smco3Q8BQM7 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Ighv1-51-201ENSMUST00000192903 354 ntBASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Gm18934-201ENSMUST00000216671 1044 ntBASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Cog3-203ENSMUST00000227473 4197 ntBASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Gm27631-201ENSMUST00000184163 466 ntBASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Gm18057-201ENSMUST00000208220 503 ntBASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco3Q8BQM7 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms