Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
Usp54Q8BL06 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC18.34■□□□□ 0.53
Usp54Q8BL06 Ntng1-201ENSMUST00000051253 327 ntBASIC18.34■□□□□ 0.53
Usp54Q8BL06 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Usp54Q8BL06 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp54Q8BL06 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp54Q8BL06 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp54Q8BL06 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Usp54Q8BL06 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp54Q8BL06 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp54Q8BL06 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp54Q8BL06 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp54Q8BL06 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp54Q8BL06 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp54Q8BL06 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Usp54Q8BL06 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Usp54Q8BL06 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Usp54Q8BL06 Gm6039-201ENSMUST00000121667 1250 ntBASIC18.33■□□□□ 0.52
Usp54Q8BL06 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC18.33■□□□□ 0.52
Usp54Q8BL06 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC18.33■□□□□ 0.52
Usp54Q8BL06 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp54Q8BL06 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC18.33■□□□□ 0.52
Usp54Q8BL06 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp54Q8BL06 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp54Q8BL06 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Usp54Q8BL06 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp54Q8BL06 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC18.33■□□□□ 0.52
Usp54Q8BL06 Gm18626-201ENSMUST00000221512 1409 ntBASIC18.33■□□□□ 0.52
Usp54Q8BL06 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp54Q8BL06 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp54Q8BL06 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Usp54Q8BL06 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp54Q8BL06 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp54Q8BL06 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp54Q8BL06 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp54Q8BL06 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp54Q8BL06 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp54Q8BL06 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp54Q8BL06 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC18.32■□□□□ 0.52
Usp54Q8BL06 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp54Q8BL06 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Usp54Q8BL06 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Usp54Q8BL06 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC18.32■□□□□ 0.52
Usp54Q8BL06 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC18.32■□□□□ 0.52
Usp54Q8BL06 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp54Q8BL06 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Usp54Q8BL06 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp54Q8BL06 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Usp54Q8BL06 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp54Q8BL06 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Usp54Q8BL06 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp54Q8BL06 AC159308.2-201ENSMUST00000213592 2325 ntBASIC18.32■□□□□ 0.52
Usp54Q8BL06 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp54Q8BL06 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Usp54Q8BL06 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp54Q8BL06 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Usp54Q8BL06 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp54Q8BL06 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp54Q8BL06 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC18.31■□□□□ 0.52
Usp54Q8BL06 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp54Q8BL06 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp54Q8BL06 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp54Q8BL06 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp54Q8BL06 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp54Q8BL06 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp54Q8BL06 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC18.31■□□□□ 0.52
Usp54Q8BL06 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Usp54Q8BL06 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Usp54Q8BL06 Gm13461-201ENSMUST00000120980 662 ntBASIC18.31■□□□□ 0.52
Usp54Q8BL06 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC18.31■□□□□ 0.52
Usp54Q8BL06 Gm9550-201ENSMUST00000161130 862 ntBASIC18.31■□□□□ 0.52
Usp54Q8BL06 Gm9230-201ENSMUST00000188228 532 ntBASIC18.31■□□□□ 0.52
Usp54Q8BL06 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC18.31■□□□□ 0.52
Usp54Q8BL06 Gm44545-201ENSMUST00000208262 746 ntBASIC18.31■□□□□ 0.52
Usp54Q8BL06 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC18.31■□□□□ 0.52
Usp54Q8BL06 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC18.31■□□□□ 0.52
Usp54Q8BL06 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC18.31■□□□□ 0.52
Usp54Q8BL06 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Usp54Q8BL06 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp54Q8BL06 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp54Q8BL06 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp54Q8BL06 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp54Q8BL06 Gm23949-201ENSMUST00000104027 127 ntBASIC18.3■□□□□ 0.52
Usp54Q8BL06 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC18.3■□□□□ 0.52
Usp54Q8BL06 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp54Q8BL06 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp54Q8BL06 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp54Q8BL06 Gm29615-201ENSMUST00000185371 697 ntBASIC18.3■□□□□ 0.52
Usp54Q8BL06 Gm28224-201ENSMUST00000186078 697 ntBASIC18.3■□□□□ 0.52
Usp54Q8BL06 Gm29001-201ENSMUST00000186177 697 ntBASIC18.3■□□□□ 0.52
Usp54Q8BL06 Gm28292-201ENSMUST00000186593 697 ntBASIC18.3■□□□□ 0.52
Usp54Q8BL06 Gm28101-201ENSMUST00000187608 697 ntBASIC18.3■□□□□ 0.52
Usp54Q8BL06 Gm29076-201ENSMUST00000187689 697 ntBASIC18.3■□□□□ 0.52
Usp54Q8BL06 Gm28302-201ENSMUST00000187931 697 ntBASIC18.3■□□□□ 0.52
Usp54Q8BL06 Gm28646-201ENSMUST00000188220 697 ntBASIC18.3■□□□□ 0.52
Usp54Q8BL06 Gm28205-201ENSMUST00000189177 697 ntBASIC18.3■□□□□ 0.52
Usp54Q8BL06 Gm29032-201ENSMUST00000189797 697 ntBASIC18.3■□□□□ 0.52
Usp54Q8BL06 Gm28695-201ENSMUST00000190300 697 ntBASIC18.3■□□□□ 0.52
Usp54Q8BL06 Gm37448-201ENSMUST00000192795 697 ntBASIC18.3■□□□□ 0.52
Usp54Q8BL06 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms