Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Gm6912-201ENSMUST00000117218 544 ntBASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Gm15460-201ENSMUST00000118147 391 ntBASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Gm24420-201ENSMUST00000176676 59 ntBASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Gm2651-201ENSMUST00000203560 838 ntBASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Gm16476-201ENSMUST00000221544 139 ntBASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc5a7Q8BGY9 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Gm18766-201ENSMUST00000189811 808 ntBASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Gm45612-201ENSMUST00000211320 160 ntBASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Psmb5-202ENSMUST00000227257 622 ntBASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc5a7Q8BGY9 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms