Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Gm13408-201ENSMUST00000119822 798 ntBASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Gm12291-201ENSMUST00000121627 311 ntBASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Gm13935-201ENSMUST00000121859 798 ntBASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trnp1Q80ZI1 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Gm14921-201ENSMUST00000118643 908 ntBASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trnp1Q80ZI1 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trnp1Q80ZI1 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trnp1Q80ZI1 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms