Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim62Q80V85 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.6□□□□□ -0.23
Trim62Q80V85 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim62Q80V85 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trim62Q80V85 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim62Q80V85 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim62Q80V85 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim62Q80V85 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.6□□□□□ -0.23
Trim62Q80V85 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trim62Q80V85 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim62Q80V85 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim62Q80V85 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim62Q80V85 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim62Q80V85 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim62Q80V85 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trim62Q80V85 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim62Q80V85 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Trim62Q80V85 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim62Q80V85 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim62Q80V85 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim62Q80V85 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim62Q80V85 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim62Q80V85 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim62Q80V85 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim62Q80V85 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim62Q80V85 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim62Q80V85 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim62Q80V85 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.59□□□□□ -0.23
Trim62Q80V85 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim62Q80V85 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim62Q80V85 Gm13369-201ENSMUST00000119442 987 ntBASIC13.59□□□□□ -0.23
Trim62Q80V85 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim62Q80V85 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim62Q80V85 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim62Q80V85 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trim62Q80V85 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.59□□□□□ -0.23
Trim62Q80V85 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim62Q80V85 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim62Q80V85 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim62Q80V85 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim62Q80V85 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim62Q80V85 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim62Q80V85 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim62Q80V85 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim62Q80V85 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim62Q80V85 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.59□□□□□ -0.23
Trim62Q80V85 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim62Q80V85 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim62Q80V85 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.23
Trim62Q80V85 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim62Q80V85 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim62Q80V85 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim62Q80V85 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.58□□□□□ -0.23
Trim62Q80V85 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim62Q80V85 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim62Q80V85 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.58□□□□□ -0.23
Trim62Q80V85 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.58□□□□□ -0.23
Trim62Q80V85 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim62Q80V85 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim62Q80V85 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim62Q80V85 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim62Q80V85 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim62Q80V85 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim62Q80V85 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.58□□□□□ -0.24
Trim62Q80V85 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim62Q80V85 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim62Q80V85 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim62Q80V85 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.58□□□□□ -0.24
Trim62Q80V85 Gm12384-201ENSMUST00000119228 919 ntBASIC13.58□□□□□ -0.24
Trim62Q80V85 Gm26185-201ENSMUST00000157692 266 ntBASIC13.58□□□□□ -0.24
Trim62Q80V85 Gm26927-201ENSMUST00000182385 965 ntBASIC13.58□□□□□ -0.24
Trim62Q80V85 Gm45784-201ENSMUST00000188360 142 ntBASIC13.58□□□□□ -0.24
Trim62Q80V85 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trim62Q80V85 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.58□□□□□ -0.24
Trim62Q80V85 Gm18062-201ENSMUST00000208020 547 ntBASIC13.58□□□□□ -0.24
Trim62Q80V85 Gm18055-201ENSMUST00000208254 547 ntBASIC13.58□□□□□ -0.24
Trim62Q80V85 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim62Q80V85 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.58□□□□□ -0.24
Trim62Q80V85 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.58□□□□□ -0.24
Trim62Q80V85 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim62Q80V85 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim62Q80V85 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim62Q80V85 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trim62Q80V85 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim62Q80V85 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trim62Q80V85 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Trim62Q80V85 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim62Q80V85 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.58□□□□□ -0.24
Trim62Q80V85 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim62Q80V85 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim62Q80V85 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim62Q80V85 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim62Q80V85 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim62Q80V85 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim62Q80V85 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim62Q80V85 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim62Q80V85 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim62Q80V85 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.57□□□□□ -0.24
Trim62Q80V85 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim62Q80V85 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms