Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Gm15770-201ENSMUST00000117498 584 ntBASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Gm14719-201ENSMUST00000121891 340 ntBASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Mir874-201ENSMUST00000104769 76 ntBASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdp1Q7TSG2 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ctdp1Q7TSG2 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.33□□□□□ -0.11
Ctdp1Q7TSG2 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ctdp1Q7TSG2 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ctdp1Q7TSG2 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdp1Q7TSG2 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ctdp1Q7TSG2 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdp1Q7TSG2 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.33□□□□□ -0.12
Ctdp1Q7TSG2 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.33□□□□□ -0.12
Ctdp1Q7TSG2 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdp1Q7TSG2 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdp1Q7TSG2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.33□□□□□ -0.12
Ctdp1Q7TSG2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdp1Q7TSG2 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ctdp1Q7TSG2 Gm43703-201ENSMUST00000200523 763 ntBASIC14.33□□□□□ -0.12
Ctdp1Q7TSG2 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.33□□□□□ -0.12
Ctdp1Q7TSG2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdp1Q7TSG2 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdp1Q7TSG2 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdp1Q7TSG2 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdp1Q7TSG2 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdp1Q7TSG2 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdp1Q7TSG2 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ctdp1Q7TSG2 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdp1Q7TSG2 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdp1Q7TSG2 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdp1Q7TSG2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdp1Q7TSG2 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.33□□□□□ -0.12
Ctdp1Q7TSG2 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ctdp1Q7TSG2 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms