Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Carlr-201ENSMUST00000181515 2574 ntBASIC11.08□□□□□ -0.64
Rif1Q6PR54 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.08□□□□□ -0.64
Rif1Q6PR54 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Gm5421-201ENSMUST00000181698 2354 ntBASIC11.07□□□□□ -0.64
Rif1Q6PR54 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Gm16305-201ENSMUST00000140747 556 ntBASIC11.07□□□□□ -0.64
Rif1Q6PR54 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Gm42657-201ENSMUST00000201746 211 ntBASIC11.07□□□□□ -0.64
Rif1Q6PR54 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.07□□□□□ -0.64
Rif1Q6PR54 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.07□□□□□ -0.64
Rif1Q6PR54 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Acot6-202ENSMUST00000222921 3622 ntBASIC11.07□□□□□ -0.64
Rif1Q6PR54 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.07□□□□□ -0.64
Rif1Q6PR54 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.07□□□□□ -0.64
Rif1Q6PR54 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Mir7686-201ENSMUST00000200604 57 ntBASIC11.07□□□□□ -0.64
Rif1Q6PR54 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Gm2517-201ENSMUST00000215651 348 ntBASIC11.07□□□□□ -0.64
Rif1Q6PR54 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.07□□□□□ -0.64
Rif1Q6PR54 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rif1Q6PR54 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.06□□□□□ -0.64
Rif1Q6PR54 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rif1Q6PR54 Gm9625-201ENSMUST00000180422 955 ntBASIC11.06□□□□□ -0.64
Rif1Q6PR54 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms