Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd4Q6PDQ2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd4Q6PDQ2 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd4Q6PDQ2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd4Q6PDQ2 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd4Q6PDQ2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd4Q6PDQ2 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Chd4Q6PDQ2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chd4Q6PDQ2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chd4Q6PDQ2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd4Q6PDQ2 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd4Q6PDQ2 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Chd4Q6PDQ2 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC16.85■□□□□ 0.29
Chd4Q6PDQ2 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chd4Q6PDQ2 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC16.85■□□□□ 0.29
Chd4Q6PDQ2 Gm26361-201ENSMUST00000158868 186 ntBASIC16.85■□□□□ 0.29
Chd4Q6PDQ2 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC16.85■□□□□ 0.29
Chd4Q6PDQ2 Gm37666-201ENSMUST00000194110 866 ntBASIC16.85■□□□□ 0.29
Chd4Q6PDQ2 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC16.85■□□□□ 0.29
Chd4Q6PDQ2 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC16.85■□□□□ 0.29
Chd4Q6PDQ2 AC154222.2-201ENSMUST00000225848 607 ntBASIC16.85■□□□□ 0.29
Chd4Q6PDQ2 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd4Q6PDQ2 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd4Q6PDQ2 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd4Q6PDQ2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.84■□□□□ 0.29
Chd4Q6PDQ2 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd4Q6PDQ2 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd4Q6PDQ2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd4Q6PDQ2 Mir6979-201ENSMUST00000183927 56 ntBASIC16.84■□□□□ 0.29
Chd4Q6PDQ2 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC16.84■□□□□ 0.29
Chd4Q6PDQ2 AC159205.5-202ENSMUST00000224849 386 ntBASIC16.84■□□□□ 0.29
Chd4Q6PDQ2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Chd4Q6PDQ2 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd4Q6PDQ2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd4Q6PDQ2 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chd4Q6PDQ2 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd4Q6PDQ2 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Chd4Q6PDQ2 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd4Q6PDQ2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd4Q6PDQ2 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Chd4Q6PDQ2 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Chd4Q6PDQ2 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd4Q6PDQ2 Gm15703-201ENSMUST00000120250 880 ntBASIC16.84■□□□□ 0.29
Chd4Q6PDQ2 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd4Q6PDQ2 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd4Q6PDQ2 Gm32999-201ENSMUST00000192693 562 ntBASIC16.84■□□□□ 0.29
Chd4Q6PDQ2 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Chd4Q6PDQ2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd4Q6PDQ2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Chd4Q6PDQ2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd4Q6PDQ2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Chd4Q6PDQ2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chd4Q6PDQ2 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chd4Q6PDQ2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
Chd4Q6PDQ2 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd4Q6PDQ2 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Chd4Q6PDQ2 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC16.83■□□□□ 0.28
Chd4Q6PDQ2 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC16.83■□□□□ 0.28
Chd4Q6PDQ2 Gm12015-201ENSMUST00000117065 843 ntBASIC16.83■□□□□ 0.28
Chd4Q6PDQ2 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC16.83■□□□□ 0.28
Chd4Q6PDQ2 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC16.83■□□□□ 0.28
Chd4Q6PDQ2 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd4Q6PDQ2 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd4Q6PDQ2 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd4Q6PDQ2 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd4Q6PDQ2 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chd4Q6PDQ2 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chd4Q6PDQ2 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd4Q6PDQ2 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd4Q6PDQ2 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd4Q6PDQ2 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 Gm37795-201ENSMUST00000194216 2459 ntBASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 Gm12566-201ENSMUST00000121479 359 ntBASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 Gm5070-201ENSMUST00000177599 862 ntBASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 Gm45433-201ENSMUST00000209386 247 ntBASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Chd4Q6PDQ2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms