Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.35■□□□□ 0.05
Smarcc2Q6PDG5 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.35■□□□□ 0.05
Smarcc2Q6PDG5 Gm27839-201ENSMUST00000184242 106 ntBASIC15.35■□□□□ 0.05
Smarcc2Q6PDG5 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.35■□□□□ 0.05
Smarcc2Q6PDG5 Gm7067-201ENSMUST00000207698 1249 ntBASIC15.35■□□□□ 0.05
Smarcc2Q6PDG5 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.35■□□□□ 0.05
Smarcc2Q6PDG5 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC15.35■□□□□ 0.05
Smarcc2Q6PDG5 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcc2Q6PDG5 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcc2Q6PDG5 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcc2Q6PDG5 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcc2Q6PDG5 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcc2Q6PDG5 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcc2Q6PDG5 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcc2Q6PDG5 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.35■□□□□ 0.05
Smarcc2Q6PDG5 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcc2Q6PDG5 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.35■□□□□ 0.05
Smarcc2Q6PDG5 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
Smarcc2Q6PDG5 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcc2Q6PDG5 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Smarcc2Q6PDG5 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcc2Q6PDG5 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcc2Q6PDG5 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Gm14127-201ENSMUST00000117906 678 ntBASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Gm38671-201ENSMUST00000200573 130 ntBASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.34■□□□□ 0.05
Smarcc2Q6PDG5 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Smarcc2Q6PDG5 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smarcc2Q6PDG5 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smarcc2Q6PDG5 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smarcc2Q6PDG5 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smarcc2Q6PDG5 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Smarcc2Q6PDG5 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.33■□□□□ 0.05
Smarcc2Q6PDG5 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smarcc2Q6PDG5 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc2Q6PDG5 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Smarcc2Q6PDG5 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc2Q6PDG5 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc2Q6PDG5 Gm4984-201ENSMUST00000115987 360 ntBASIC15.33■□□□□ 0.04
Smarcc2Q6PDG5 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.33■□□□□ 0.04
Smarcc2Q6PDG5 Gm27486-201ENSMUST00000184923 80 ntBASIC15.33■□□□□ 0.04
Smarcc2Q6PDG5 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc2Q6PDG5 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.33■□□□□ 0.04
Smarcc2Q6PDG5 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc2Q6PDG5 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc2Q6PDG5 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc2Q6PDG5 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.33■□□□□ 0.04
Smarcc2Q6PDG5 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Smarcc2Q6PDG5 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc2Q6PDG5 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc2Q6PDG5 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc2Q6PDG5 Pcgf5-211ENSMUST00000225920 6443 ntBASIC15.33■□□□□ 0.04
Smarcc2Q6PDG5 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc2Q6PDG5 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc2Q6PDG5 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc2Q6PDG5 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc2Q6PDG5 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc2Q6PDG5 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc2Q6PDG5 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms