Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd3Q6P9Z1 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Smarcd3Q6P9Z1 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms