Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Gm15371-201ENSMUST00000117057 784 ntBASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Gm15678-201ENSMUST00000117573 960 ntBASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Gm9794-201ENSMUST00000202370 423 ntBASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Gm9908-201ENSMUST00000211534 448 ntBASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ParpbpQ6IRT3 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.36□□□□□ -0.43
ParpbpQ6IRT3 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
ParpbpQ6IRT3 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms