Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
VcanQ62059 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
VcanQ62059 Gm14585-201ENSMUST00000120713 634 ntBASIC12.02□□□□□ -0.49
VcanQ62059 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.02□□□□□ -0.49
VcanQ62059 Gm13182-201ENSMUST00000122241 312 ntBASIC12.02□□□□□ -0.49
VcanQ62059 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.02□□□□□ -0.49
VcanQ62059 Gm5616-201ENSMUST00000165252 384 ntBASIC12.02□□□□□ -0.49
VcanQ62059 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.02□□□□□ -0.49
VcanQ62059 Gm18201-201ENSMUST00000174735 875 ntBASIC12.02□□□□□ -0.49
VcanQ62059 Gm8741-201ENSMUST00000174736 384 ntBASIC12.02□□□□□ -0.49
VcanQ62059 Gm22877-201ENSMUST00000175451 105 ntBASIC12.02□□□□□ -0.49
VcanQ62059 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
VcanQ62059 Gm5904-201ENSMUST00000210286 865 ntBASIC12.02□□□□□ -0.49
VcanQ62059 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.02□□□□□ -0.49
VcanQ62059 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
VcanQ62059 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.02□□□□□ -0.49
VcanQ62059 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
VcanQ62059 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.02□□□□□ -0.49
VcanQ62059 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VcanQ62059 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VcanQ62059 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VcanQ62059 Gm1848-201ENSMUST00000120711 789 ntBASIC12.02□□□□□ -0.49
VcanQ62059 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
VcanQ62059 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.02□□□□□ -0.49
VcanQ62059 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VcanQ62059 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
VcanQ62059 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VcanQ62059 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
VcanQ62059 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
VcanQ62059 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.01□□□□□ -0.49
VcanQ62059 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.01□□□□□ -0.49
VcanQ62059 Gm18463-201ENSMUST00000207258 474 ntBASIC12.01□□□□□ -0.49
VcanQ62059 Gm18460-201ENSMUST00000208088 464 ntBASIC12.01□□□□□ -0.49
VcanQ62059 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VcanQ62059 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VcanQ62059 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VcanQ62059 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
VcanQ62059 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VcanQ62059 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VcanQ62059 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VcanQ62059 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VcanQ62059 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VcanQ62059 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.01□□□□□ -0.49
VcanQ62059 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
VcanQ62059 Gm28071-201ENSMUST00000190355 478 ntBASIC12.01□□□□□ -0.49
VcanQ62059 Gm18038-201ENSMUST00000197900 485 ntBASIC12.01□□□□□ -0.49
VcanQ62059 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.01□□□□□ -0.49
VcanQ62059 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VcanQ62059 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VcanQ62059 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VcanQ62059 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VcanQ62059 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VcanQ62059 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VcanQ62059 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VcanQ62059 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VcanQ62059 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VcanQ62059 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VcanQ62059 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
VcanQ62059 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VcanQ62059 Gm5909-201ENSMUST00000119768 1281 ntBASIC12.01□□□□□ -0.49
VcanQ62059 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VcanQ62059 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.01□□□□□ -0.49
VcanQ62059 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.01□□□□□ -0.49
VcanQ62059 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.01□□□□□ -0.49
VcanQ62059 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
VcanQ62059 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.01□□□□□ -0.49
VcanQ62059 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
VcanQ62059 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VcanQ62059 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VcanQ62059 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VcanQ62059 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VcanQ62059 Gm42863-201ENSMUST00000197875 2958 ntBASIC12□□□□□ -0.49
VcanQ62059 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VcanQ62059 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VcanQ62059 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VcanQ62059 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12□□□□□ -0.49
VcanQ62059 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
VcanQ62059 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VcanQ62059 Gm5733-201ENSMUST00000190232 939 ntBASIC12□□□□□ -0.49
VcanQ62059 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VcanQ62059 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12□□□□□ -0.49
VcanQ62059 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
VcanQ62059 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VcanQ62059 Gm8617-201ENSMUST00000118796 2222 ntBASIC12□□□□□ -0.49
VcanQ62059 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12□□□□□ -0.49
VcanQ62059 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
VcanQ62059 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VcanQ62059 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12□□□□□ -0.49
VcanQ62059 Gm27530-201ENSMUST00000184096 98 ntBASIC12□□□□□ -0.49
VcanQ62059 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12□□□□□ -0.49
VcanQ62059 Gm44158-201ENSMUST00000203881 505 ntBASIC12□□□□□ -0.49
VcanQ62059 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12□□□□□ -0.49
VcanQ62059 Gm22058-201ENSMUST00000083393 310 ntBASIC12□□□□□ -0.49
VcanQ62059 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12□□□□□ -0.49
VcanQ62059 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
VcanQ62059 Gm42872-201ENSMUST00000200026 1967 ntBASIC12□□□□□ -0.49
VcanQ62059 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
VcanQ62059 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VcanQ62059 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12□□□□□ -0.49
VcanQ62059 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms