Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.26□□□□□ -0.29
Six4Q61321 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Six4Q61321 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Six4Q61321 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six4Q61321 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six4Q61321 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six4Q61321 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six4Q61321 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Six4Q61321 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six4Q61321 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Six4Q61321 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six4Q61321 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Six4Q61321 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six4Q61321 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six4Q61321 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Six4Q61321 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six4Q61321 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.25□□□□□ -0.29
Six4Q61321 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Six4Q61321 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Six4Q61321 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Six4Q61321 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.25□□□□□ -0.29
Six4Q61321 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six4Q61321 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six4Q61321 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six4Q61321 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Six4Q61321 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six4Q61321 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six4Q61321 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six4Q61321 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six4Q61321 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.25□□□□□ -0.29
Six4Q61321 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.25□□□□□ -0.29
Six4Q61321 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.25□□□□□ -0.29
Six4Q61321 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six4Q61321 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six4Q61321 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Six4Q61321 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Six4Q61321 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Six4Q61321 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.25□□□□□ -0.29
Six4Q61321 Gm6266-201ENSMUST00000203844 806 ntBASIC13.25□□□□□ -0.29
Six4Q61321 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.25□□□□□ -0.29
Six4Q61321 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.25□□□□□ -0.29
Six4Q61321 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Six4Q61321 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Six4Q61321 Gm10146-201ENSMUST00000072739 309 ntBASIC13.25□□□□□ -0.29
Six4Q61321 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six4Q61321 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six4Q61321 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six4Q61321 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six4Q61321 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six4Q61321 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six4Q61321 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Six4Q61321 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six4Q61321 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six4Q61321 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six4Q61321 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six4Q61321 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six4Q61321 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six4Q61321 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.24□□□□□ -0.29
Six4Q61321 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six4Q61321 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six4Q61321 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six4Q61321 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.24□□□□□ -0.29
Six4Q61321 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.24□□□□□ -0.29
Six4Q61321 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six4Q61321 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six4Q61321 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six4Q61321 Mir686-201ENSMUST00000102174 109 ntBASIC13.24□□□□□ -0.29
Six4Q61321 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six4Q61321 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six4Q61321 Gm4984-201ENSMUST00000115987 360 ntBASIC13.24□□□□□ -0.29
Six4Q61321 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.24□□□□□ -0.29
Six4Q61321 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Six4Q61321 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.24□□□□□ -0.29
Six4Q61321 Gm4271-201ENSMUST00000174444 973 ntBASIC13.24□□□□□ -0.29
Six4Q61321 Gm29649-201ENSMUST00000185649 419 ntBASIC13.24□□□□□ -0.29
Six4Q61321 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.24□□□□□ -0.29
Six4Q61321 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Six4Q61321 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.24□□□□□ -0.29
Six4Q61321 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.24□□□□□ -0.29
Six4Q61321 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six4Q61321 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six4Q61321 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six4Q61321 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six4Q61321 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six4Q61321 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six4Q61321 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.24□□□□□ -0.29
Six4Q61321 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Six4Q61321 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six4Q61321 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six4Q61321 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six4Q61321 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six4Q61321 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six4Q61321 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six4Q61321 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six4Q61321 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.23□□□□□ -0.29
Six4Q61321 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six4Q61321 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Six4Q61321 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Six4Q61321 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.23□□□□□ -0.29
Six4Q61321 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms